Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB63344.1Hypothetical protein. (75 aa)    
Predicted Functional Partners:
KXB63343.1
KEGG: mha:HF1_00990 2.1e-09 dUTPase; dimeric dUTPase; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB63345.1
KEGG: set:SEN1949A 8.5e-13 crossover junction endodeoxyribonucleaseRusE K01160; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB63346.1
Hypothetical protein.
       0.773
KXB63347.1
Hypothetical protein.
       0.689
KXB63348.1
KEGG: zin:ZICARI_131 4.1e-45 dnaB; replicative DNA helicase; K02314 replicative DNA helicase; Psort location: Cytoplasmic, score: 9.97.
       0.689
KXB63349.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.689
KXB63342.1
Hypothetical protein.
       0.476
KXB63350.1
Hypothetical protein.
       0.467
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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