Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB63348.1KEGG: zin:ZICARI_131 4.1e-45 dnaB; replicative DNA helicase; K02314 replicative DNA helicase; Psort location: Cytoplasmic, score: 9.97. (422 aa)    
Predicted Functional Partners:
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.
 
 
 0.903
KXB63349.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.802
KXB63347.1
Hypothetical protein.
       0.773
dnaA
Replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 0.773
KXB63345.1
KEGG: set:SEN1949A 8.5e-13 crossover junction endodeoxyribonucleaseRusE K01160; Psort location: Cytoplasmic, score: 8.96.
       0.707
KXB63343.1
KEGG: mha:HF1_00990 2.1e-09 dUTPase; dimeric dUTPase; Psort location: Cytoplasmic, score: 8.96.
       0.689
KXB63344.1
Hypothetical protein.
       0.689
KXB63346.1
Hypothetical protein.
       0.689
KXB66071.1
Hypothetical protein; KEGG: lba:Lebu_2064 7.9e-152 ATPase; K02341 DNA polymerase III subunit delta'; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.552
KXB63350.1
Hypothetical protein.
       0.517
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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