Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TrkHCation transport protein; KEGG: ssr:SALIVB_0283 4.2e-114 DNA polymerase IV K03498; Psort location: CytoplasmicMembrane, score: 10.00. (481 aa)    
Predicted Functional Partners:
trkA
Putative potassium transporter peripheral membrane component; KEGG: scp:HMPREF0833_11023 7.8e-90 ktrA; Trk family potassium (K+) transporter, NAD+ binding protein K03499; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
 0.950
KXB64520.1
KEGG: lba:Lebu_0381 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
   
   0.668
KXB69054.1
TrkA protein; KEGG: suq:HMPREF0772_12145 4.1e-29 ktrA; Trk family potassium (K+) transporter, NAD+ binding protein K03499; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.605
KXB65473.1
Ion channel; KEGG: isc:IscW_ISCW006705 7.3e-16 voltage-gated channel, putative K05320; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.605
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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