Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB63066.1KEGG: mpu:MYPU_3950 1.3e-204 type III restriction-modification system: methylase; Psort location: Cytoplasmic, score: 8.96. (681 aa)    
Predicted Functional Partners:
KXB67724.1
Hypothetical protein; KEGG: mpu:MYPU_3950 2.5e-45 type III restriction-modification system: methylase; Psort location: Cytoplasmic, score: 8.96.
 
     0.976
KXB63067.1
DNA (cytosine-5-)-methyltransferase; KEGG: mpu:MYPU_3980 9.3e-142 type III restriction-modification system: methylase K00571; Psort location: Cytoplasmic, score: 8.96.
 
     0.946
KXB63590.1
KEGG: smf:Smon_0088 3.1e-127 adenine-specific DNA-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
     0.575
KXB63068.1
Hypothetical protein; KEGG: fnu:FN0522 0.00016 exonuclease SbcC K03546; Psort location: Cytoplasmic, score: 8.96.
       0.570
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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