Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
KXB63067.1DNA (cytosine-5-)-methyltransferase; KEGG: mpu:MYPU_3980 9.3e-142 type III restriction-modification system: methylase K00571; Psort location: Cytoplasmic, score: 8.96. (674 aa)    
Predicted Functional Partners:
KXB63066.1
KEGG: mpu:MYPU_3950 1.3e-204 type III restriction-modification system: methylase; Psort location: Cytoplasmic, score: 8.96.
 
     0.946
KXB67724.1
Hypothetical protein; KEGG: mpu:MYPU_3950 2.5e-45 type III restriction-modification system: methylase; Psort location: Cytoplasmic, score: 8.96.
 
     0.773
KXB69116.1
KEGG: vpr:Vpar_0449 2.1e-270 type III restriction protein res subunit; K01156 type III restriction enzyme.
 
  
 0.725
KXB69483.1
Hypothetical protein; KEGG: lba:Lebu_0154 4.2e-272 type III restriction protein res subunit; K01156 type III restriction enzyme; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.690
KXB69484.1
Hypothetical protein; KEGG: lba:Lebu_0154 3.5e-66 type III restriction protein res subunit; K01156 type III restriction enzyme; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.687
KXB68660.1
Hypothetical protein; KEGG: lba:Lebu_0148 1.2e-61 adenine-specific DNA-methyltransferase; K07316 adenine-specific DNA-methyltransferase.
  
     0.612
KXB63068.1
Hypothetical protein; KEGG: fnu:FN0522 0.00016 exonuclease SbcC K03546; Psort location: Cytoplasmic, score: 8.96.
       0.570
KXB68662.1
Helicase protein; KEGG: mph:MLP_35860 3.6e-172 putative helicase; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.473
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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