Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
KXB62189.1Hypothetical protein; KEGG: zin:ZICARI_100 0.00021 nuoJ; putative NADH:ubiquinone oxidoreductase, membrane subunit J; K00339 NADH-quinone oxidoreductase subunit J; Psort location: CytoplasmicMembrane, score: 10.00. (143 aa)    
Predicted Functional Partners:
KXB62190.1
Phage integrase, SAM-like domain protein; KEGG: pfe:PSF113_1062 5.4e-34 xerD; XerD protein K04763; Psort location: Cytoplasmic, score: 9.97; Belongs to the 'phage' integrase family.
       0.773
recN
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.773
KXB62192.1
Hypothetical protein.
       0.518
nadK
Putative inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
       0.518
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.473
KXB62188.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.473
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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