Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB62196.1Hypothetical protein; KEGG: hpa:HPAG1_0201 1.1e-05 putative transposase OrfB K07496. (66 aa)    
Predicted Functional Partners:
KXB62125.1
Transposase, IS605 OrfB family; KEGG: hpa:HPAG1_0201 2.3e-21 putative transposase OrfB K07496.
 
     0.806
KXB62120.1
Hypothetical protein; KEGG: hpa:HPAG1_0201 2.2e-08 putative transposase OrfB K07496; Psort location: Cytoplasmic, score: 8.96.
 
     0.802
KXB62086.1
Hypothetical protein; KEGG: hpa:HPAG1_0201 1.8e-09 putative transposase OrfB K07496.
 
     0.799
KXB59706.1
Hypothetical protein; KEGG: hpa:HPAG1_0201 1.3e-16 putative transposase OrfB K07496; Psort location: Cytoplasmic, score: 8.96.
  
     0.774
KXB62140.1
Hypothetical protein; KEGG: efc:EFAU004_02276 8.4e-22 IS200/IS605 family transposase.
       0.527
KXB62195.1
Hypothetical protein.
       0.497
KXB62194.1
Hypothetical protein.
       0.460
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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