Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB62143.1Hypothetical protein; KEGG: hpa:HPAG1_0201 5.4e-06 putative transposase OrfB K07496. (77 aa)    
Predicted Functional Partners:
KXB62125.1
Transposase, IS605 OrfB family; KEGG: hpa:HPAG1_0201 2.3e-21 putative transposase OrfB K07496.
     0.934
KXB62086.1
Hypothetical protein; KEGG: hpa:HPAG1_0201 1.8e-09 putative transposase OrfB K07496.
     0.932
KXB62120.1
Hypothetical protein; KEGG: hpa:HPAG1_0201 2.2e-08 putative transposase OrfB K07496; Psort location: Cytoplasmic, score: 8.96.
     0.921
KXB59706.1
Hypothetical protein; KEGG: hpa:HPAG1_0201 1.3e-16 putative transposase OrfB K07496; Psort location: Cytoplasmic, score: 8.96.
 
     0.856
KXB62142.1
Hypothetical protein; KEGG: ase:ACPL_2243 0.0024 Modification methylase BabI; Psort location: Cytoplasmic, score: 8.96.
       0.412
KXB62141.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.405
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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