Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB61411.1Hydrolase, NUDIX family; KEGG: sgg:SGGBAA2069_c14730 1.2e-59 MutT/NUDIX hydrolase family protein; Psort location: Cytoplasmic, score: 8.96. (216 aa)    
Predicted Functional Partners:
KXB61412.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.701
KXB61413.1
Hypothetical protein; KEGG: bcc:BCc_127 0.0011 thrA; hypothetical protein K12524; Psort location: CytoplasmicMembrane, score: 10.00.
       0.701
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
       0.701
KXB61415.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.641
KXB61416.1
Hypothetical protein; KEGG: btu:BT0343 0.0074 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435; Psort location: Cytoplasmic, score: 8.96.
       0.594
KXB61417.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.548
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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