Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
deoBPhosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. (414 aa)    
Predicted Functional Partners:
Pdp
KEGG: lba:Lebu_0788 4.3e-192 pyrimidine-nucleoside phosphorylase; K00756 pyrimidine-nucleoside phosphorylase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.965
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
 
 0.955
KXB70343.1
KEGG: lba:Lebu_2089 1.3e-275 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; K01835 phosphoglucomutase; Psort location: Cytoplasmic, score: 8.96.
     
 0.905
RpiB2
KEGG: lba:Lebu_1155 6.8e-75 RpiB/LacA/LacB family sugar-phosphate isomerase; K01808 ribose 5-phosphate isomerase B; Psort location: Cytoplasmic, score: 8.96.
     
 0.903
KXB59761.1
Ribose-5-phosphate isomerase B; KEGG: lba:Lebu_1298 2.7e-64 RpiB/LacA/LacB family sugar-phosphate isomerase; K01808 ribose 5-phosphate isomerase B; Psort location: Cytoplasmic, score: 8.96.
     
 0.903
KXB60706.1
Putative ribose-phosphate diphosphokinase; KEGG: lba:Lebu_2159 2.1e-112 ribose-phosphate pyrophosphokinase; K00948 ribose-phosphate pyrophosphokinase; Psort location: Cytoplasmic, score: 9.97.
     
 0.902
KXB69101.1
Transketolase, thiamine diphosphate binding domain protein; KEGG: lba:Lebu_1006 2.2e-147 transketolase; K00615 transketolase; Psort location: Cytoplasmic, score: 9.97.
    
  0.901
Tkt
Transketolase, thiamine diphosphate binding domain protein; KEGG: lba:Lebu_1902 3.1e-134 transketolase; K00615 transketolase; Psort location: Cytoplasmic, score: 9.26.
    
  0.901
KXB69100.1
KEGG: lba:Lebu_1007 2.2e-149 transketolase; K00615 transketolase; Psort location: Cytoplasmic, score: 9.97.
     
  0.900
KXB66085.1
Transketolase, pyridine binding domain protein; KEGG: lba:Lebu_1901 1.8e-145 transketolase; K00615 transketolase; Psort location: Cytoplasmic, score: 9.97.
     
  0.900
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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