Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB61431.1UbiC transcription regulator-associated domain protein; KEGG: bcz:BCZK3111 6.4e-24 GntR family transcriptional regulator K00837; Psort location: Cytoplasmic, score: 9.97. (241 aa)    
Predicted Functional Partners:
KXB66339.1
PTS system, glucose-like IIB component; KEGG: str:Sterm_2418 3.3e-137 PTS system glucose-like transporter subunit IIB; K02818 PTS system, trehalose-specific IIB component K02819; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.710
KXB69982.1
KEGG: hso:HS_0087 1.9e-70 nadR; nicotinamide-nucleotide adenylyltransferase K06211; Psort location: Cytoplasmic, score: 8.96.
   
  
 0.611
KXB69220.1
KEGG: yen:YE0580 1.6e-82 b4390; nicotinamide-nucleotide adenylyltransferase K06211; Psort location: Cytoplasmic, score: 8.96.
   
  
 0.611
KXB61432.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: lmo:lmo0432 5.1e-70 hypothetical protein; K00540; Psort location: Cytoplasmic, score: 9.97; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.520
KXB59851.1
Putative N-acetylmuramic acid phosphotransfer permease; KEGG: smf:Smon_0971 3.6e-179 PTS system transporter subunit IIC; K02809 PTS system, sucrose-specific IIB component K02810; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.455
KXB61430.1
Putative pectate lyase; KEGG: bsu:BSU07560 8.9e-105 pel; pectate lyase K01728; Psort location: Extracellular, score: 9.72.
       0.441
MapP
Endonuclease/exonuclease/phosphatase family protein; KEGG: cbj:H04402_01676 5.9e-60 exodeoxyribonuclease III; Psort location: Cytoplasmic, score: 8.96.
 
     0.421
KXB67924.1
Hypothetical protein; KEGG: lba:Lebu_2238 1.8e-16 PTS system beta-glucoside-specific transporter subunit IIABC; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757.
  
  
 0.419
KXB67252.1
Putative glucose-specific phosphotransferase enzyme IIA component; KEGG: lba:Lebu_1372 5.7e-55 PTS system glucose subfamily transporter subunit IIA; K02777 PTS system, glucose-specific IIA component; Psort location: Cytoplasmic, score: 9.26.
  
  
 0.419
Crr
Putative glucose-specific phosphotransferase enzyme IIA component; KEGG: lba:Lebu_1372 1.7e-78 PTS system glucose subfamily transporter subunit IIA; K02777 PTS system, glucose-specific IIA component; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.419
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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