Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB61369.1Tetratricopeptide repeat protein; KEGG: tet:TTHERM_00391570 1.6e-09 DNA polymerase family B containing protein K02350; Psort location: Cytoplasmic, score: 8.96. (205 aa)    
Predicted Functional Partners:
KXB59510.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_00257190 7.6e-12 TPR Domain containing protein; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.654
KXB59911.1
Hypothetical protein; KEGG: fnu:FN0891 5.6e-48 DNAse I homologous protein DHP2 precursor K01157.
  
     0.613
KXB64535.1
Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
  
     0.605
KXB66334.1
Putative acyl carrier protein; KEGG: lba:Lebu_0132 0. AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase; Psort location: CytoplasmicMembrane, score: 7.88.
  
     0.578
KXB67231.1
KEGG: lba:Lebu_1817 1.2e-157 DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta; Psort location: Cytoplasmic, score: 8.96.
 
     0.577
KXB67713.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.489
KXB61704.1
Hypothetical protein; KEGG: stk:STP_1439 1.6e-08 truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase; Psort location: Cytoplasmic, score: 8.96.
  
     0.478
KXB70041.1
KEGG: chu:CHU_2979 6.1e-09 TPR repeat-containing protein K06026; Psort location: Cytoplasmic, score: 8.96.
 
 
   0.455
KXB65504.1
Hypothetical protein; KEGG: edi:EDI_282700 0.0034 structural maintenance of chromosomes protein K06669; Psort location: Cytoplasmic, score: 8.96.
  
     0.441
KXB61368.1
PP-loop family protein; KEGG: reh:H16_A0260 7.7e-35 h16_A0260; C32 tRNA thiolase K14058; Psort location: Cytoplasmic, score: 9.97; Belongs to the TtcA family.
       0.435
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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