Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB61382.1KEGG: lba:Lebu_0786 1.2e-217 saccharopine dehydrogenase; K00290 saccharopine dehydrogenase (NAD+, L-lysine forming); Psort location: Cytoplasmic, score: 8.96. (404 aa)    
Predicted Functional Partners:
KXB64846.1
KEGG: lba:Lebu_0820 1.5e-203 carboxynorspermidine decarboxylase; K13747 carboxynorspermidine decarboxylase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.980
SpeB
Agmatinase; KEGG: lba:Lebu_1823 6.4e-150 agmatinase; K01480 agmatinase; Psort location: Cytoplasmic, score: 8.96; Belongs to the arginase family.
   
 0.962
SpeA
Putative arginine 2-monooxygenase; KEGG: aoe:Clos_0383 1.7e-195 Orn/Lys/Arg decarboxylase major region; K01582 lysine decarboxylase; Psort location: Cytoplasmic, score: 9.97.
 
  
  0.927
Crr
Putative glucose-specific phosphotransferase enzyme IIA component; KEGG: lba:Lebu_1372 1.7e-78 PTS system glucose subfamily transporter subunit IIA; K02777 PTS system, glucose-specific IIA component; Psort location: Cytoplasmic, score: 9.97.
       0.449
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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