Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB61342.1Hypothetical protein. (555 aa)    
Predicted Functional Partners:
KXB67961.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.777
KXB61339.1
KEGG: noc:Noc_2705 3.7e-12 Sel1 repeat-containing protein K07126; Psort location: Cytoplasmic, score: 8.96.
  
    0.776
KXB61340.1
KEGG: bgb:KK9_0800 7.2e-05 hypothetical protein; K02343 DNA polymerase III subunit gamma/tau; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB61341.1
Hypothetical protein; KEGG: smf:Smon_0699 8.5e-06 peptidase U32; K08303 putative protease; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB61343.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.691
KXB67963.1
Tetratricopeptide repeat protein; KEGG: cfu:CFU_0128 1.0e-19 Ser/Thr phosphatase.
 
  
 0.667
KXB61421.1
Amidohydrolase family protein; KEGG: bmq:BMQ_3613 3.6e-60 amidohydrolase.
  
     0.594
KXB61338.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.480
KXB61344.1
DnaJ domain protein; KEGG: apb:SAR116_1614 1.7e-14 DnaJ family molecular chaperone K03686; Psort location: Cytoplasmic, score: 9.26.
       0.480
KXB59891.1
TIGR02594 family protein; KEGG: edi:EDI_341030 1.7e-14 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96.
 
    0.462
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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