Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB61343.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (271 aa)    
Predicted Functional Partners:
KXB61342.1
Hypothetical protein.
       0.691
KXB61339.1
KEGG: noc:Noc_2705 3.7e-12 Sel1 repeat-containing protein K07126; Psort location: Cytoplasmic, score: 8.96.
       0.686
KXB61340.1
KEGG: bgb:KK9_0800 7.2e-05 hypothetical protein; K02343 DNA polymerase III subunit gamma/tau; Psort location: Cytoplasmic, score: 8.96.
       0.686
KXB61341.1
Hypothetical protein; KEGG: smf:Smon_0699 8.5e-06 peptidase U32; K08303 putative protease; Psort location: Cytoplasmic, score: 8.96.
       0.686
KXB66342.1
PASTA domain protein; KEGG: lba:Lebu_2190 1.4e-136 protein PASTA domain-containing protein; K08884 serine/threonine protein kinase, bacterial; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.651
LpdA
Dihydrolipoyl dehydrogenase; KEGG: lba:Lebu_0545 2.8e-243 dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
    
 
 0.594
KXB61344.1
DnaJ domain protein; KEGG: apb:SAR116_1614 1.7e-14 DnaJ family molecular chaperone K03686; Psort location: Cytoplasmic, score: 9.26.
   
   0.581
KXB67974.1
Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system family protein; KEGG: lba:Lebu_0543 7.7e-138 dihydrolipoamide acetyltransferase; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); Psort location: Cytoplasmic, score: 9.97.
    
 
 0.579
KXB59510.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_00257190 7.6e-12 TPR Domain containing protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.530
KXB69683.1
Bacterial type II/III secretion system short domain protein; KEGG: mru:mru_1319 1.4e-07 DEAD/DEAH box helicase domain-containing protein; K03725 archaea-specific helicase; Belongs to the bacterial secretin family.
  
  
 0.483
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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