STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB61349.1Hypothetical protein. (124 aa)    
Predicted Functional Partners:
KXB61348.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.590
KXB61350.1
Hypothetical protein; KEGG: pbe:PB000482.00.0 0.0027 histidine--tRNA ligase; K01892 histidyl-tRNA synthetase; Psort location: Cytoplasmic, score: 8.96.
       0.541
KXB61347.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
       0.505
KXB61345.1
Hypothetical protein; KEGG: mok:Metok_1084 0.0032 dihydroorotase, multifunctional complex type K01465; Psort location: Cytoplasmic, score: 8.96.
       0.484
KXB61346.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.484
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.