Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXB60997.1MATE efflux family protein; KEGG: rcp:RCAP_rcc02680 2.3e-22 mdtK; multidrug resistance protein MdtK K03327; Psort location: CytoplasmicMembrane, score: 10.00. (439 aa)    
Predicted Functional Partners:
KXB60996.1
Putative HTH-type transcriptional activator HxlR; Psort location: Cytoplasmic, score: 8.96.
  
   0.569
KXB64440.1
Hypothetical protein; KEGG: pmm:PMM1692 0.0024 p-aminobenzoate synthetase; K01665 para-aminobenzoate synthetase component I.
  
     0.499
KXB64462.1
Hypothetical protein; KEGG: pmm:PMM1692 0.0024 p-aminobenzoate synthetase; K01665 para-aminobenzoate synthetase component I.
  
     0.497
KXB60540.1
Initiator RepB protein; KEGG: nms:NMBM01240355_0508 0.0027 initiator repB protein family; Psort location: Cytoplasmic, score: 8.96.
  
     0.474
KXB60999.1
Auxin efflux carrier; KEGG: azo:azo2550 1.3e-12 mdcF3; putative malonate transporter K07088; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.463
KXB69539.1
Initiator RepB protein; KEGG: nms:NMBM01240355_0508 0.0030 initiator repB protein family; Psort location: Cytoplasmic, score: 8.96.
  
     0.452
KXB67902.1
Acetyltransferase, GNAT family; KEGG: npu:Npun_F5089 1.8e-12 N-acetyltransferase GCN5; K03830 putative acetyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
     0.446
KXB60731.1
Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: lba:Lebu_0114 1.2e-173 glyceraldehyde-3-phosphate dehydrogenase; K00134 glyceraldehyde 3-phosphate dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
   
    0.415
KXB59300.1
Putative ribosomal protein S1; KEGG: fnu:FN1781 1.4e-76 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945:K03527; Psort location: Cytoplasmic, score: 9.97.
   
    0.409
KXB60998.1
Hypothetical protein; KEGG: lba:Lebu_1832 4.4e-09 glutamine synthetase; K01915 glutamine synthetase.
       0.408
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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