Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cobDCobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (317 aa)    
Predicted Functional Partners:
KXB67942.1
Putative adenosylcobalamin biosynthesis protein CobU; KEGG: lba:Lebu_0472 1.2e-82 cobalbumin biosynthesis protein; K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.984
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
 
 0.984
KXB60911.1
Aminotransferase, class I/II; KEGG: lba:Lebu_0041 1.8e-186 threonine-phosphate decarboxylase; K04720 threonine-phosphate decarboxylase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.970
KXB61558.1
KEGG: aur:HMPREF9243_0416 4.8e-42 ATP:cob(I)alamin adenosyltransferase; Psort location: Cytoplasmic, score: 9.97.
    
 0.917
cbiA
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
  
 0.876
cobS
adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
   
 0.849
KXB63238.1
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; KEGG: lba:Lebu_0558 1.3e-149 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyl transferase; K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.845
KXB60893.1
KEGG: lba:Lebu_0096 5.2e-84 precorrin-8X methylmutase CbiC/CobH; K06042 precorrin-8X methylmutase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.777
KXB64544.1
KEGG: lba:Lebu_0415 4.7e-115 precorrin-3B C(17)-methyltransferase; K05934 precorrin-3B C17-methyltransferase; Psort location: Cytoplasmic, score: 9.26.
 
  
 0.614
KXB60713.1
KEGG: lba:Lebu_0100 2.5e-107 precorrin-2 C(20)-methyltransferase; K03394 precorrin-2/cobalt-factor-2 C20-methyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.611
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
Server load: low (36%) [HD]