Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXB60917.1Hypothetical protein; KEGG: zin:ZICARI_050 3.8e-07 rpoB; putative DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta; Psort location: Cytoplasmic, score: 8.96. (436 aa)    
Predicted Functional Partners:
KXB60916.1
Peptidase family S51; KEGG: lba:Lebu_1856 3.9e-79 peptidase S51 dipeptidase E; K05995 dipeptidase E; Psort location: Cytoplasmic, score: 9.97.
       0.773
KXB60918.1
Hypothetical protein; KEGG: pfd:PFDG_01246 0.00017 hypothetical protein similar to dihydrolipoamide S-acetyltransferase; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB60915.1
KEGG: lba:Lebu_1857 2.4e-118 ABC transporter; K06861 lipopolysaccharide export system ATP-binding protein; Psort location: Cytoplasmic, score: 9.12.
       0.701
KXB65937.1
KEGG: edi:EDI_341030 7.7e-06 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96.
  
    0.621
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
       0.543
KXB59617.1
KEGG: fma:FMG_1532 2.0e-297 type I restriction-modification system DNA methylase; K03427 type I restriction enzyme M protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.486
KXB60914.1
Hypothetical protein.
       0.445
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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