Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cbiNCobalt transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family. (100 aa)    
Predicted Functional Partners:
cbiM
Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
 
 
 0.994
KXB60890.1
KEGG: rcp:RCAP_rcc02035 0.00012 cbiQ2; cobalt ABC transporter permease CbiQ K02008; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.994
KXB60891.1
Cobalt ABC transporter, ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 
 0.990
cbiA
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
       0.802
KXB60887.1
Cobalt chelatase; KEGG: lba:Lebu_0022 1.9e-102 anaerobic cobalt chelatase; K02190 sirohydrochlorin cobaltochelatase; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.691
KXB60893.1
KEGG: lba:Lebu_0096 5.2e-84 precorrin-8X methylmutase CbiC/CobH; K06042 precorrin-8X methylmutase; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.580
cbiD
Cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
  
 0.564
KXB60895.1
KEGG: lba:Lebu_0508 3.3e-75 precorrin-6y C5,15-methyltransferase subunit CbiE; K03399 precorrin-6Y C5,15-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.539
KXB60726.1
CbiG protein; KEGG: lba:Lebu_0414 7.0e-144 cobalamin biosynthesis protein CbiG; K02189 cobalt-precorrin 5A hydrolase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.478
KXB64111.1
Cobalt transport protein; KEGG: bya:BANAU_0146 8.6e-20 ybaF; putative ABC transporter ATP-binding protein K02008; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.463
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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