Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB60890.1KEGG: rcp:RCAP_rcc02035 0.00012 cbiQ2; cobalt ABC transporter permease CbiQ K02008; Psort location: CytoplasmicMembrane, score: 10.00. (231 aa)    
Predicted Functional Partners:
KXB60891.1
Cobalt ABC transporter, ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 0.995
cbiM
Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
 
 
 0.994
cbiN
Cobalt transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
 
 
 0.994
KXB64108.1
KEGG: cpo:COPRO5265_0238 3.8e-58 cobalt import ATP-binding protein CbiO K02006; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.848
KXB64110.1
KEGG: cpo:COPRO5265_0237 2.2e-60 cobalt import ATP-binding protein CbiO 1 K02006; Psort location: CytoplasmicMembrane, score: 7.88.
  
 0.825
cbiA
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
  
    0.792
KXB59947.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_0095 3.2e-148 Xenobiotic-transporting ATPase., polyamine-transporting ATPase K02006; Psort location: CytoplasmicMembrane, score: 7.88.
  
 0.770
KXB68827.1
BioY family protein; KEGG: apb:SAR116_1163 3.6e-30 biotin biosynthesis protein BioY K03523; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.569
KXB66226.1
BioY family protein; KEGG: apb:SAR116_1163 5.8e-30 biotin biosynthesis protein BioY K03523; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.569
KXB60925.1
Permease, YjgP/YjgQ family; KEGG: ftg:FTU_1345 3.7e-08 Permease YjgP K07091; Psort location: CytoplasmicMembrane, score: 10.00.
     
  0.540
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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