Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXB60715.1Hypothetical protein; KEGG: tgu:100220202 0.00048 mitofusin 1; K06030 mitofusin. (227 aa)    
Predicted Functional Partners:
KXB60713.1
KEGG: lba:Lebu_0100 2.5e-107 precorrin-2 C(20)-methyltransferase; K03394 precorrin-2/cobalt-factor-2 C20-methyltransferase; Psort location: Cytoplasmic, score: 9.97.
       0.623
KXB60714.1
Hypothetical protein; KEGG: zin:ZICARI_100 0.0013 nuoJ; putative NADH:ubiquinone oxidoreductase, membrane subunit J; K00339 NADH-quinone oxidoreductase subunit J; Psort location: CytoplasmicMembrane, score: 10.00.
       0.623
KXB60712.1
Hypothetical protein; KEGG: bba:Bd0515 5.3e-20 uroporphyrin-III C-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.419
KXB60716.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.417
KXB60717.1
HTH-type transcriptional activator HxlR; Psort location: Cytoplasmic, score: 9.97.
       0.417
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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