Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXB60748.1Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 2.8e-19 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family. (319 aa)    
Predicted Functional Partners:
KXB62190.1
Phage integrase, SAM-like domain protein; KEGG: pfe:PSF113_1062 5.4e-34 xerD; XerD protein K04763; Psort location: Cytoplasmic, score: 9.97; Belongs to the 'phage' integrase family.
  
     0.598
KXB66568.1
Phage integrase, SAM-like domain protein; KEGG: bsr:I33_1800 6.1e-42 xerC; ATP-dependent protease HslV K03733; Psort location: Cytoplasmic, score: 9.97; Belongs to the 'phage' integrase family.
  
     0.539
KXB60752.1
Putative O-antigen export system ATP-binding protein RfbB; KEGG: gth:Geoth_0298 6.0e-83 Teichoic-acid-transporting ATPase K09691; Psort location: CytoplasmicMembrane, score: 9.99.
  
    0.477
KXB60747.1
Oligoendopeptidase, M3 family; KEGG: lba:Lebu_0122 4.1e-290 oligoendopeptidase; K01417; Psort location: Cytoplasmic, score: 8.96.
       0.476
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
    0.466
KXB70237.1
comF family protein; KEGG: pva:Pvag_2959 7.2e-10 yhgH; amidophosphoribosyltransferase; Psort location: Cytoplasmic, score: 8.96.
   
    0.407
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.401
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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