Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB60752.1Putative O-antigen export system ATP-binding protein RfbB; KEGG: gth:Geoth_0298 6.0e-83 Teichoic-acid-transporting ATPase K09691; Psort location: CytoplasmicMembrane, score: 9.99. (242 aa)    
Predicted Functional Partners:
KXB60751.1
ABC-2 type transporter; KEGG: suc:ECTR2_1887 0.0042 accessory gene regulator B family protein K07813; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
KXB60753.1
KEGG: pyo:PY00626 6.6e-05 hypothetical protein; K10866 DNA repair protein RAD50.
 
    0.709
KXB70237.1
comF family protein; KEGG: pva:Pvag_2959 7.2e-10 yhgH; amidophosphoribosyltransferase; Psort location: Cytoplasmic, score: 8.96.
   
    0.537
KXB60754.1
Hypothetical protein; KEGG: lba:Lebu_2159 3.1e-47 ribose-phosphate pyrophosphokinase; K00948 ribose-phosphate pyrophosphokinase; Psort location: Cytoplasmic, score: 9.26.
       0.529
KXB60750.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
     
 0.501
KXB61321.1
Glycosyltransferase, group 2 family protein; KEGG: rsl:RPSI07_2662 1.1e-44 glycosyltransferase protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.488
KXB60748.1
Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 2.8e-19 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
  
    0.477
KXB60749.1
KEGG: dds:Ddes_0107 6.4e-63 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Psort location: CytoplasmicMembrane, score: 9.99.
     
 0.451
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
  
    0.432
KXB64574.1
Putative arabinose 5-phosphate isomerase; KEGG: lba:Lebu_0520 6.4e-150 KpsF/GutQ family protein; K06041 arabinose-5-phosphate isomerase; Psort location: Cytoplasmic, score: 8.96; Belongs to the SIS family. GutQ/KpsF subfamily.
     
 0.415
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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