STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60451.1Antibiotic biosynthesis monooxygenase; KEGG: bsa:Bacsa_1222 0.0015 Carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase. (115 aa)    
Predicted Functional Partners:
KXB60450.1
Antibiotic biosynthesis monooxygenase; KEGG: pdi:BDI_0712 1.8e-07 carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase.
    
0.975
KXB60452.1
KEGG: mct:MCR_1819 4.3e-18 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
 
     0.805
KXB60453.1
Cupin domain protein; KEGG: amu:Amuc_1806 7.5e-69 Carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.741
IolS
Oxidoreductase, aldo/keto reductase family protein; KEGG: eum:ECUMN_1771 1.8e-83 putative Tas protein; Psort location: Cytoplasmic, score: 9.97.
 
     0.685
KXB60454.1
Flavodoxin; KEGG: tle:Tlet_0030 0.0076 flavodoxin-like protein; K00230 menaquinone-dependent protoporphyrinogen oxidase.
       0.571
KXB59664.1
Hydrolase, alpha/beta domain protein; KEGG: fna:OOM_0020 1.9e-22 alpha/beta fold family hydrolase; Psort location: Cytoplasmic, score: 8.96.
 
     0.491
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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