Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
KXB60453.1Cupin domain protein; KEGG: amu:Amuc_1806 7.5e-69 Carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase; Psort location: Cytoplasmic, score: 8.96. (251 aa)    
Predicted Functional Partners:
KXB59662.1
Cupin domain protein; KEGG: rsc:RCFBP_20794 7.2e-32 carboxymuconolactone decarboxylase.
 
  
0.929
KXB60454.1
Flavodoxin; KEGG: tle:Tlet_0030 0.0076 flavodoxin-like protein; K00230 menaquinone-dependent protoporphyrinogen oxidase.
 
     0.924
KXB60452.1
KEGG: mct:MCR_1819 4.3e-18 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
 
  
 0.863
KXB59665.1
Hypothetical protein; KEGG: hso:HS_1210 0.0028 fldA; flavodoxin FldA K03839.
 
     0.779
KXB60450.1
Antibiotic biosynthesis monooxygenase; KEGG: pdi:BDI_0712 1.8e-07 carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase.
 
  
 0.746
KXB59661.1
Hypothetical protein.
 
  
 0.736
KXB60451.1
Antibiotic biosynthesis monooxygenase; KEGG: bsa:Bacsa_1222 0.0015 Carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase.
  
  
 0.712
KXB59664.1
Hydrolase, alpha/beta domain protein; KEGG: fna:OOM_0020 1.9e-22 alpha/beta fold family hydrolase; Psort location: Cytoplasmic, score: 8.96.
 
    0.651
IolS
Oxidoreductase, aldo/keto reductase family protein; KEGG: eum:ECUMN_1771 1.8e-83 putative Tas protein; Psort location: Cytoplasmic, score: 9.97.
       0.578
KXB61322.1
Hypothetical protein; KEGG: gvh:HMPREF9231_1277 1.5e-08 peptidase, S9A/B/C family, catalytic domain protein.
 
     0.547
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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