Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXB60459.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (308 aa)    
Predicted Functional Partners:
LpdA
Dihydrolipoyl dehydrogenase; KEGG: lba:Lebu_0545 2.8e-243 dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
 
 0.952
KXB67928.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_01109810 5.8e-08 Tubulin-tyrosine ligase family protein; Psort location: Cytoplasmic, score: 8.96.
   
   0.777
pcp
Pyroglutamyl-peptidase I; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.
  
 
   0.689
KXB59745.1
ATPase, AAA family; KEGG: atm:ANT_16460 6.3e-72 putative ATPase; Psort location: CytoplasmicMembrane, score: 7.88.
  
 
 0.644
KXB64075.1
Hypothetical protein.
   
   0.642
KXB67973.1
KEGG: lba:Lebu_0542 1.6e-162 transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta; Psort location: Cytoplasmic, score: 9.97.
    
  0.609
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.592
KXB66342.1
PASTA domain protein; KEGG: lba:Lebu_2190 1.4e-136 protein PASTA domain-containing protein; K08884 serine/threonine protein kinase, bacterial; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.580
msrA-2
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
   0.574
KXB60458.1
Hypothetical protein.
       0.558
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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