Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB60199.1Hypothetical protein; KEGG: pfa:PF08_0086 8.7e-09 RNA binding protein, putative; K12735 peptidyl-prolyl cis-trans isomerase-like 4; Psort location: Cytoplasmic, score: 8.96. (608 aa)    
Predicted Functional Partners:
KXB60200.1
Cell wall-binding repeat protein; KEGG: pfa:PF14_0392 1.8e-15 serine/threonine protein kinase, putative; K08282 non-specific serine/threonine protein kinase.
 
    
0.699
KXB60201.1
Hypothetical protein; KEGG: baf:BAPKO_0677 0.00015 recC; exodeoxyribonuclease V, gamma chain; K03583 exodeoxyribonuclease V gamma subunit; Psort location: Cytoplasmic, score: 8.96.
 
    
0.602
KXB67928.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_01109810 5.8e-08 Tubulin-tyrosine ligase family protein; Psort location: Cytoplasmic, score: 8.96.
    
  0.596
KXB60203.1
DnaJ domain protein; KEGG: zin:ZICARI_071 1.9e-07 metG; putative methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase; Psort location: CytoplasmicMembrane, score: 9.16.
 
 
  0.559
HscC
DnaK family protein; KEGG: bpy:Bphyt_7074 5.0e-95 2-alkenal reductase K04045; Psort location: Cytoplasmic, score: 9.97; Belongs to the heat shock protein 70 family.
   
  0.476
KXB60204.1
DnaJ domain protein; KEGG: pbe:PB000529.01.0 1.6e-06 asparagine--tRNA ligase; K01876 aspartyl-tRNA synthetase; Psort location: CytoplasmicMembrane, score: 9.16.
   
  0.439
KXB64075.1
Hypothetical protein.
   
 0.403
KXB59745.1
ATPase, AAA family; KEGG: atm:ANT_16460 6.3e-72 putative ATPase; Psort location: CytoplasmicMembrane, score: 7.88.
    
  0.400
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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