Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB60205.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (223 aa)    
Predicted Functional Partners:
KXB60204.1
DnaJ domain protein; KEGG: pbe:PB000529.01.0 1.6e-06 asparagine--tRNA ligase; K01876 aspartyl-tRNA synthetase; Psort location: CytoplasmicMembrane, score: 9.16.
       0.536
KXB60203.1
DnaJ domain protein; KEGG: zin:ZICARI_071 1.9e-07 metG; putative methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase; Psort location: CytoplasmicMembrane, score: 9.16.
       0.533
HscC
DnaK family protein; KEGG: bpy:Bphyt_7074 5.0e-95 2-alkenal reductase K04045; Psort location: Cytoplasmic, score: 9.97; Belongs to the heat shock protein 70 family.
       0.471
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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