Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB60126.1Acetyltransferase, GNAT family; KEGG: lba:Lebu_1510 9.3e-55 N-acetyltransferase GCN5; K03789 ribosomal-protein-alanine N-acetyltransferase; Psort location: Cytoplasmic, score: 9.97. (184 aa)    
Predicted Functional Partners:
KXB60127.1
Protein, SNF2 family; KEGG: ate:Athe_0035 6.0e-138 non-specific serine/threonine protein kinase; Psort location: Cytoplasmic, score: 8.96.
       0.661
KXB60125.1
KEGG: lba:Lebu_1511 1.3e-236 signal peptidase I; K03100 signal peptidase I; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the peptidase S26 family.
  
  
 0.623
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
     
 0.518
KXB64189.1
Universal bacterial protein YeaZ; KEGG: fnu:FN0928 5.1e-22 O-sialoglycoprotein endopeptidase K01409; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.478
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
 
   
 0.470
rplS
Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
   
   0.434
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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