Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB59882.1ABC transporter, permease protein; KEGG: clo:HMPREF0868_1418 1.1e-53 ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein K02029; Psort location: CytoplasmicMembrane, score: 10.00. (521 aa)    
Predicted Functional Partners:
KXB59883.1
Glutamine ABC transporter, ATP-binding protein GlnQ; KEGG: lba:Lebu_0705 1.3e-121 ABC transporter; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.
 0.995
KXB66202.1
Arginine ABC transporter, ATP-binding protein ArtM; KEGG: lba:Lebu_0350 2.3e-115 ABC transporter; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.875
KXB65492.1
Arginine ABC transporter, ATP-binding protein ArtM; KEGG: brm:Bmur_1866 1.8e-90 ABC transporter; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.874
GlnQ_3
KEGG: sca:Sca_1431 6.7e-68 glnQ; glutamate ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.837
KXB66235.1
Glutamine ABC transporter, ATP-binding protein GlnQ; KEGG: lba:Lebu_0353 7.9e-129 ABC transporter; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.827
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
   
 
 0.783
KXB65491.1
Putative arginine ABC transporter, permease protein ArtQ; KEGG: npu:Npun_F6325 3.1e-31 polar amino acid ABC transporter inner membrane subunit K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
0.578
KXB66201.1
ABC transporter, permease protein; KEGG: npu:Npun_F6325 1.3e-30 polar amino acid ABC transporter inner membrane subunit K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
0.567
KXB59880.1
NlpC/P60 family protein; KEGG: eci:UTI89_C1901 1.1e-19 nlpC; lipoprotein NlpC K13695.
     
 0.558
KXB66234.1
KEGG: hpa:HPAG1_1109 1.3e-46 glutamine ABC transporter, permease protein K02029; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
0.548
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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