Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB59923.1NlpC/P60 family protein; KEGG: cth:Cthe_0605 3.2e-22 peptidase PgdS; K01447 N-acetylmuramoyl-L-alanine amidase. (179 aa)    
Predicted Functional Partners:
engB
Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
  
    0.688
KXB59924.1
Hypothetical protein.
       0.443
KXB59922.1
HTH domain protein; KEGG: bqy:MUS_2079 1.4e-37 transcriptional regulator; Psort location: Cytoplasmic, score: 8.96.
       0.434
KXB59510.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_00257190 7.6e-12 TPR Domain containing protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.429
KXB70302.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
   0.424
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
 
   
 0.402
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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