Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lolDPutative lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. (232 aa)    
Predicted Functional Partners:
KXB59933.1
Lipoprotein releasing system, transmembrane protein, LolC/E family; KEGG: apb:SAR116_0522 2.3e-35 ABC transporter permease K09808; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.997
KXB64845.1
Efflux ABC transporter, permease protein; KEGG: bya:BANAU_1347 4.4e-48 yknZ; Macrolide export ATP-binding/permease protein macB K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.985
KXB69094.1
Putative oligopeptide ABC transporter, ATP-binding protein AppF; KEGG: efc:EFAU004_00135 7.6e-115 oppF; peptide ABC transporter ATP-binding protein K02032; Psort location: CytoplasmicMembrane, score: 9.99.
 
   
0.782
KXB59926.1
Hypothetical protein.
   
 
 0.656
tsaD
Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
    0.585
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
   
 0.552
KXB59931.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.517
KXB59932.1
Trypsin; KEGG: sng:SNE_A06530 3.0e-81 deGP10; protease Do-like 10; Psort location: Periplasmic, score: 9.76.
       0.504
KXB64843.1
Efflux transporter, RND family, MFP subunit; KEGG: pfe:PSF113_1858 5.9e-09 pyoverdine-specific efflux macA-like protein K13888; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.500
pheS
KEGG: lba:Lebu_2182 5.8e-165 phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain; Psort location: Cytoplasmic, score: 10.00.
 
 
   0.492
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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