STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB59956.1Hypothetical protein. (43 aa)    
Predicted Functional Partners:
KXB59957.1
Hypothetical protein; KEGG: vpo:Kpol_1071p4 4.4e-05 hypothetical protein; K02150 V-type H+-transporting ATPase subunit E.
       0.709
KXB59958.1
Hypothetical protein.
       0.645
KXB59959.1
Hypothetical protein; KEGG: tal:Thal_0218 4.2e-05 metal dependent phosphohydrolase K06950.
       0.501
miaA
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
       0.429
KXB59955.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: str:Sterm_3758 4.2e-31 PTS system fructose subfamily transporter subunit IIC; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: Cytoplasmic, score: 9.97.
       0.429
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.