Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXB59842.1Hypothetical protein. (160 aa)    
Predicted Functional Partners:
KXB59841.1
KEGG: lba:Lebu_0869 1.4e-129 HisJ family histidinol phosphate phosphatase; K04486 histidinol-phosphatase (PHP family); Psort location: Cytoplasmic, score: 8.96; Belongs to the PHP hydrolase family. HisK subfamily.
       0.664
KXB59843.1
Hydrolase, NUDIX family; KEGG: lba:Lebu_0871 1.3e-73 NUDIX hydrolase; K01515 ADP-ribose pyrophosphatase; Psort location: Cytoplasmic, score: 8.96.
       0.554
KXB59839.1
KEGG: bya:BANAU_1353 7.0e-192 ykpA; putative ABC transporter ATP-binding protein; Psort location: Cytoplasmic, score: 9.97.
       0.490
KXB59840.1
Hypothetical protein.
       0.490
KXB59844.1
Magnesium transporter; Acts as a magnesium transporter.
       0.447
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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