Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB59843.1Hydrolase, NUDIX family; KEGG: lba:Lebu_0871 1.3e-73 NUDIX hydrolase; K01515 ADP-ribose pyrophosphatase; Psort location: Cytoplasmic, score: 8.96. (166 aa)    
Predicted Functional Partners:
KXB70343.1
KEGG: lba:Lebu_2089 1.3e-275 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; K01835 phosphoglucomutase; Psort location: Cytoplasmic, score: 8.96.
    
  0.900
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
     
  0.900
KXB60706.1
Putative ribose-phosphate diphosphokinase; KEGG: lba:Lebu_2159 2.1e-112 ribose-phosphate pyrophosphokinase; K00948 ribose-phosphate pyrophosphokinase; Psort location: Cytoplasmic, score: 9.97.
     
  0.900
KXB59844.1
Magnesium transporter; Acts as a magnesium transporter.
       0.610
KXB59842.1
Hypothetical protein.
       0.554
KXB59845.1
Hypothetical protein.
       0.524
KXB59841.1
KEGG: lba:Lebu_0869 1.4e-129 HisJ family histidinol phosphate phosphatase; K04486 histidinol-phosphatase (PHP family); Psort location: Cytoplasmic, score: 8.96; Belongs to the PHP hydrolase family. HisK subfamily.
       0.483
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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