Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB59737.1Hypothetical protein; KEGG: fnu:FN0522 0.0023 exonuclease SbcC K03546; Psort location: Cytoplasmic, score: 8.96. (388 aa)    
Predicted Functional Partners:
KXB59736.1
KEGG: fbr:FBFL15_2697 3.8e-12 putative phosphatidate cytidylyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.883
KXB59738.1
KEGG: str:Sterm_1949 1.8e-184 pyruvate phosphate dikinase PEP/pyruvate-binding protein; K01007 pyruvate, water dikinase; Psort location: Cytoplasmic, score: 8.96.
 
     0.802
KXB59732.1
Hypothetical protein; KEGG: str:Sterm_1948 8.8e-50 UbiA prenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.781
KXB59734.1
AMP-binding enzyme; KEGG: pbs:Plabr_4645 1.7e-37 long-chain-fatty-acid--CoA ligase; Psort location: Cytoplasmic, score: 8.96.
 
     0.631
KXB59735.1
Hypothetical protein; KEGG: pdi:BDI_0475 9.7e-05 phosphinothricin N-acetyltransferase; K03823 phosphinothricin acetyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
     0.613
KXB59739.1
Toxin-antitoxin system, toxin component domain protein; KEGG: pbe:PB000769.02.0 0.0099 GTP cyclohydrolase I; K01495 GTP cyclohydrolase I; Psort location: Cytoplasmic, score: 8.96.
       0.566
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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