Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB59762.1Histidine triad domain protein; KEGG: fnu:FN1873 1.8e-33 bis(5'-nucleosyl)-tetraphosphatase K01518; Psort location: Cytoplasmic, score: 9.97. (113 aa)    
Predicted Functional Partners:
KXB68662.1
Helicase protein; KEGG: mph:MLP_35860 3.6e-172 putative helicase; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.846
KXB67926.1
Putative NAD-dependent deacetylase; KEGG: lba:Lebu_2235 1.5e-118 silent information regulator protein Sir2; K12410 NAD-dependent deacetylase; Psort location: Cytoplasmic, score: 9.97.
  
 
  0.774
KXB59763.1
Hypothetical protein; KEGG: pfh:PFHG_00215 3.5e-10 conserved hypothetical protein; K00914 phosphatidylinositol 3-kinase; Psort location: Cytoplasmic, score: 8.96.
  
    0.664
udk
Uridine kinase; KEGG: lba:Lebu_1122 1.9e-102 uridine kinase; K00876 uridine kinase; Psort location: Cytoplasmic, score: 9.97.
   
  0.643
KXB59761.1
Ribose-5-phosphate isomerase B; KEGG: lba:Lebu_1298 2.7e-64 RpiB/LacA/LacB family sugar-phosphate isomerase; K01808 ribose 5-phosphate isomerase B; Psort location: Cytoplasmic, score: 8.96.
       0.585
KXB64520.1
KEGG: lba:Lebu_0381 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
  
   0.539
lysS
lysine--tRNA ligase; KEGG: lba:Lebu_0134 8.4e-251 lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 0.500
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.