Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB59613.1Putative HTH-type transcriptional activator HxlR; Psort location: Cytoplasmic, score: 9.26. (111 aa)    
Predicted Functional Partners:
KXB59614.1
Cupin domain protein; KEGG: cfu:CFU_0599 5.7e-07 manC; auxin-binding protein.
       0.508
KXB69982.1
KEGG: hso:HS_0087 1.9e-70 nadR; nicotinamide-nucleotide adenylyltransferase K06211; Psort location: Cytoplasmic, score: 8.96.
   
    0.444
KXB69220.1
KEGG: yen:YE0580 1.6e-82 b4390; nicotinamide-nucleotide adenylyltransferase K06211; Psort location: Cytoplasmic, score: 8.96.
   
    0.444
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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