Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB59614.1Cupin domain protein; KEGG: cfu:CFU_0599 5.7e-07 manC; auxin-binding protein. (116 aa)    
Predicted Functional Partners:
KXB59613.1
Putative HTH-type transcriptional activator HxlR; Psort location: Cytoplasmic, score: 9.26.
       0.508
KXB59615.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
       0.447
KXB59616.1
KEGG: pmz:HMPREF0659_A7007 1.7e-46 type I restriction modification DNA specificity domain protein; K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 8.96.
       0.438
KXB59617.1
KEGG: fma:FMG_1532 2.0e-297 type I restriction-modification system DNA methylase; K03427 type I restriction enzyme M protein; Psort location: Cytoplasmic, score: 8.96.
       0.438
KXB66574.1
KEGG: dds:Ddes_0107 5.7e-71 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.413
KXB60749.1
KEGG: dds:Ddes_0107 6.4e-63 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.413
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.