Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB59480.1Hypothetical protein; KEGG: dmo:Dmoj_GI21761 2.3e-08 GI21761 gene product from transcript GI21761-RA; K09188 histone-lysine N-methyltransferase MLL3. (204 aa)    
Predicted Functional Partners:
KXB59481.1
KEGG: lba:Lebu_2268 9.4e-268 ABC transporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA; Psort location: CytoplasmicMembrane, score: 10.00.
       0.693
KXB59482.1
Lipooligosaccharide sialyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.601
KXB59483.1
KEGG: chu:CHU_0603 9.7e-28 polysaccharide deacetylase K01452; Psort location: Cytoplasmic, score: 8.96.
       0.589
mfd
Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
       0.453
KXB59479.1
Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
       0.453
KXB59484.1
Glycosyltransferase, group 2 family protein; KEGG: sez:Sez_0842 0.00040 glycosyltransferase; K12998 glucosyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.410
KXB59485.1
Glycosyltransferase, group 2 family protein; KEGG: gau:GAU_0664 1.8e-51 putative glycosyltransferase; Psort location: CytoplasmicMembrane, score: 7.88.
       0.410
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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