Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gpmA2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (228 aa)    
Predicted Functional Partners:
pgk
KEGG: lba:Lebu_0298 3.8e-200 phosphoglycerate kinase; K00927 phosphoglycerate kinase; Psort location: Cytoplasmic, score: 9.97.
   
 0.960
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
 0.957
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
 0.924
KXB69389.1
KEGG: lba:Lebu_2077 1.3e-238 aldehyde dehydrogenase; K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP); Psort location: Cytoplasmic, score: 9.97.
    
 0.912
SerA
KEGG: lba:Lebu_1043 2.7e-261 D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase; Psort location: Cytoplasmic, score: 9.97; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.902
KXB66215.1
Fructose-1,6-bisphosphate aldolase, class II; KEGG: lba:Lebu_2198 3.7e-170 fructose-1,6-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II; Psort location: Cytoplasmic, score: 9.97.
   
 0.901
pgi
KEGG: lba:Lebu_2138 2.2e-234 glucose-6-phosphate isomerase; K01810 glucose-6-phosphate isomerase; Psort location: Cytoplasmic, score: 9.97; Belongs to the GPI family.
   
 0.894
fda
Fructose-bisphosphate aldolase class-I; KEGG: lba:Lebu_1787 6.6e-148 fructose-1,6-bisphosphate aldolase; K01623 fructose-bisphosphate aldolase, class I; Psort location: Cytoplasmic, score: 8.96.
  
 0.836
ppc
Phosphoenolpyruvate carboxykinase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.
     
 0.811
KXB69100.1
KEGG: lba:Lebu_1007 2.2e-149 transketolase; K00615 transketolase; Psort location: Cytoplasmic, score: 9.97.
     
  0.800
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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