Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXB59267.1Hypothetical protein; KEGG: clj:CLJU_c10710 0.0044 signal peptidase; K03101 signal peptidase II; Psort location: CytoplasmicMembrane, score: 9.80. (429 aa)    
Predicted Functional Partners:
KXB59268.1
GtrA-like protein; KEGG: cyp:PCC8801_3886 3.3e-07 dolichyl-phosphate beta-D-mannosyltransferase K00721; Psort location: CytoplasmicMembrane, score: 10.00.
       0.446
KXB59269.1
Glycosyltransferase, group 2 family protein; KEGG: hhd:HBHAL_1983 6.5e-70 group 2 glycosyltransferase; Psort location: CytoplasmicMembrane, score: 7.88.
       0.401
KXB59270.1
Hypothetical protein; KEGG: crp:CRP_118 8.6e-07 lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II; Psort location: CytoplasmicMembrane, score: 10.00.
       0.401
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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