STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMM38292.12,4-diaminobutyrate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (494 aa)    
Predicted Functional Partners:
KMM38293.1
2,4-diaminobutyrate 4-aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 0.980
KMM38290.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.960
KMM38289.1
Lysine 6-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.956
KMM38291.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.956
KMM38288.1
Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.952
KMM38402.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.841
KMM38369.1
Lysine 6-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.812
KMM35878.1
Ornithine monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.806
glsA
Glutaminase; Catalyzes the formation of glutamate from glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family.
  
 
 0.754
hisI
phosphoribosyl-ATP pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the N-terminal section; belongs to the PRA-CH family.
    
 0.754
Your Current Organism:
Anaerobacillus macyae
NCBI taxonomy Id: 157733
Other names: A. macyae, Bacillus macyae, Bacillus macyae Santini et al. 2004, Bacillus sp. JMM-4, DSM 16346, JCM 12340, strain JMM-4
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