STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMM39557.1Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family. (473 aa)    
Predicted Functional Partners:
KMM37813.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
   0.749
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.725
KMM38103.1
Chalcone synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.718
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
    
   0.718
ybeY
rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.718
KMM38431.1
Phytoene desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.600
KMM38493.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.588
KMM38433.1
Phytoene desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.583
KMM38495.1
Phytoene desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.572
KMM38494.1
Capsular biosynthesis protein CpsH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.563
Your Current Organism:
Anaerobacillus macyae
NCBI taxonomy Id: 157733
Other names: A. macyae, Bacillus macyae, Bacillus macyae Santini et al. 2004, Bacillus sp. JMM-4, DSM 16346, JCM 12340, strain JMM-4
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