STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB80041.1Oligopeptide transport system permease protein. (307 aa)    
Predicted Functional Partners:
SDB80043.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.998
SDB80042.1
Oligopeptide transport system permease protein.
 
0.997
SDB85841.1
Peptide/nickel transport system substrate-binding protein.
 0.994
SDB80044.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.993
SDB85826.1
Peptide/nickel transport system permease protein.
 
 0.992
SDB80040.1
Oligopeptide transport system substrate-binding protein.
 
 0.991
SDB85819.1
Peptide/nickel transport system ATP-binding protein.
 0.987
SDB80208.1
Peptide/nickel transport system substrate-binding protein.
 0.982
SDB85813.1
Peptide/nickel transport system ATP-binding protein.
 
 0.978
SDB93900.1
Peptide/nickel transport system substrate-binding protein.
 
 0.922
Your Current Organism:
Raineyella antarctica
NCBI taxonomy Id: 1577474
Other names: ATCC TSD-18, DSM 100494, JCM 30886, Propionibacteriaceae bacterium 10J, Propionibacteriaceae bacterium LZ-22, R. antarctica, Raineyella antarctica Pikuta et al. 2016, strain LZ-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.