STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB80376.1Hypothetical protein. (130 aa)    
Predicted Functional Partners:
SDB80375.1
Hypothetical protein.
       0.773
SDB80377.1
Lysophospholipase L1.
       0.547
SDB80373.1
FMN reductase.
  
    0.532
SDB80374.1
Putative luciferase-like monooxygenase, FMN-dependent, CE1758 family.
       0.529
SDB83192.1
PAC2 family protein.
   
    0.414
SDB84184.1
PAC2 family protein.
   
    0.414
SDB93922.1
Predicted ATP-dependent carboligase, ATP-grasp superfamily.
   
    0.414
Your Current Organism:
Raineyella antarctica
NCBI taxonomy Id: 1577474
Other names: ATCC TSD-18, DSM 100494, JCM 30886, Propionibacteriaceae bacterium 10J, Propionibacteriaceae bacterium LZ-22, R. antarctica, Raineyella antarctica Pikuta et al. 2016, strain LZ-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.