Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDB80450.1 | SDB80465.1 | GA0111570_102240 | GA0111570_102255 | Arsenical resistance operon trans-acting repressor ArsD. | Arsenite efflux ATP-binding protein ArsA. | 0.895 |
| SDB80463.1 | SDB80464.1 | GA0111570_102253 | GA0111570_102254 | Uncharacterized conserved protein, DUF2249 family. | Threonine synthase. | 0.450 |
| SDB80463.1 | SDB80465.1 | GA0111570_102253 | GA0111570_102255 | Uncharacterized conserved protein, DUF2249 family. | Arsenite efflux ATP-binding protein ArsA. | 0.407 |
| SDB80464.1 | SDB80463.1 | GA0111570_102254 | GA0111570_102253 | Threonine synthase. | Uncharacterized conserved protein, DUF2249 family. | 0.450 |
| SDB80464.1 | SDB80465.1 | GA0111570_102254 | GA0111570_102255 | Threonine synthase. | Arsenite efflux ATP-binding protein ArsA. | 0.712 |
| SDB80464.1 | SDB80467.1 | GA0111570_102254 | GA0111570_102257 | Threonine synthase. | NADH dehydrogenase subunit M. | 0.414 |
| SDB80464.1 | nuoN | GA0111570_102254 | GA0111570_102256 | Threonine synthase. | NADH dehydrogenase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. | 0.443 |
| SDB80465.1 | SDB80450.1 | GA0111570_102255 | GA0111570_102240 | Arsenite efflux ATP-binding protein ArsA. | Arsenical resistance operon trans-acting repressor ArsD. | 0.895 |
| SDB80465.1 | SDB80463.1 | GA0111570_102255 | GA0111570_102253 | Arsenite efflux ATP-binding protein ArsA. | Uncharacterized conserved protein, DUF2249 family. | 0.407 |
| SDB80465.1 | SDB80464.1 | GA0111570_102255 | GA0111570_102254 | Arsenite efflux ATP-binding protein ArsA. | Threonine synthase. | 0.712 |
| SDB80465.1 | SDB80467.1 | GA0111570_102255 | GA0111570_102257 | Arsenite efflux ATP-binding protein ArsA. | NADH dehydrogenase subunit M. | 0.458 |
| SDB80465.1 | SDB84785.1 | GA0111570_102255 | GA0111570_104357 | Arsenite efflux ATP-binding protein ArsA. | Hypothetical protein. | 0.518 |
| SDB80465.1 | SDB94023.1 | GA0111570_102255 | GA0111570_11098 | Arsenite efflux ATP-binding protein ArsA. | Orotidine-5'-phosphate decarboxylase. | 0.716 |
| SDB80465.1 | SDC05237.1 | GA0111570_102255 | GA0111570_11620 | Arsenite efflux ATP-binding protein ArsA. | cation:H+ antiporter. | 0.405 |
| SDB80465.1 | ileS | GA0111570_102255 | GA0111570_10399 | Arsenite efflux ATP-binding protein ArsA. | Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. | 0.416 |
| SDB80465.1 | nuoN | GA0111570_102255 | GA0111570_102256 | Arsenite efflux ATP-binding protein ArsA. | NADH dehydrogenase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. | 0.492 |
| SDB80465.1 | secY | GA0111570_102255 | GA0111570_11363 | Arsenite efflux ATP-binding protein ArsA. | Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.415 |
| SDB80467.1 | SDB80464.1 | GA0111570_102257 | GA0111570_102254 | NADH dehydrogenase subunit M. | Threonine synthase. | 0.414 |
| SDB80467.1 | SDB80465.1 | GA0111570_102257 | GA0111570_102255 | NADH dehydrogenase subunit M. | Arsenite efflux ATP-binding protein ArsA. | 0.458 |
| SDB80467.1 | SDB84785.1 | GA0111570_102257 | GA0111570_104357 | NADH dehydrogenase subunit M. | Hypothetical protein. | 0.885 |
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