STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB80841.1MFS transporter, NNP family, nitrate/nitrite transporter. (471 aa)    
Predicted Functional Partners:
SDB98848.1
Respiratory nitrate reductase alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.987
SDB98823.1
Respiratory nitrate reductase beta subunit.
 
 
 0.982
SDB80845.1
Assimilatory nitrite reductase (NAD(P)H) small subunit.
 
 
 0.975
SDB98772.1
Respiratory nitrate reductase gamma subunit.
 
 
 0.974
SDB80839.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.965
SDB80849.1
Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 
 0.952
SDB80835.1
Assimilatory nitrate reductase (NADH) beta subunit.
 
 
 0.925
SDB98800.1
Respiratory nitrate reductase chaperone NarJ.
 
  
 0.925
SDB80851.1
uroporphyrinogen-III synthase.
 
  
 0.875
SDB88687.1
Nitrite reductase (NO-forming).
    
 0.722
Your Current Organism:
Raineyella antarctica
NCBI taxonomy Id: 1577474
Other names: ATCC TSD-18, DSM 100494, JCM 30886, Propionibacteriaceae bacterium 10J, Propionibacteriaceae bacterium LZ-22, R. antarctica, Raineyella antarctica Pikuta et al. 2016, strain LZ-22
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