STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB81295.1ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. (280 aa)    
Predicted Functional Partners:
SDB81298.1
NitT/TauT family transport system ATP-binding protein.
 
 0.998
SDB81304.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.988
SDB79759.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.976
SDB81290.1
NitT/TauT family transport system permease protein.
 
  
 
0.903
SDB80374.1
Putative luciferase-like monooxygenase, FMN-dependent, CE1758 family.
  
 
 0.781
SDB91716.1
Probable oxidoreductase, LLM family.
  
 
 0.781
SDB80373.1
FMN reductase.
  
 
  0.780
SDB80839.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.750
SDB81739.1
Molydopterin dinucleotide binding domain-containing protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.712
SDB81137.1
Isopenicillin N synthase.
      0.637
Your Current Organism:
Raineyella antarctica
NCBI taxonomy Id: 1577474
Other names: ATCC TSD-18, DSM 100494, JCM 30886, Propionibacteriaceae bacterium 10J, Propionibacteriaceae bacterium LZ-22, R. antarctica, Raineyella antarctica Pikuta et al. 2016, strain LZ-22
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